Guide

How to manage overtime, bonuses and commissions for service teams

Paying overtime or bonuses? Learn how to handle extra pay and keep your payroll compliant with Xero

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Written by Michelle Ives—Content Writer, Communications Strategist, and former Product & Tech Writer at Xero. Read Michelle's full bio

Published Tuesday 16 September 2025

Table of contents

Key takeaways

  • Service business payroll often includes complex pay elements like overtime, bonuses, and commissions.
  • Rules vary: in Australia, overtime is set by modern awards/enterprise agreements; in New Zealand, by employment contracts.
  • Transparent bonus criteria and automated payroll systems reduce errors and keep businesses compliant.
  • Commission tracking works best when integrated with payroll runs to ensure accuracy and timeliness.
  • Compliance with tax, superannuation, and KiwiSaver obligations protects businesses and builds employee trust.

Understanding variable pay components in service businesses

Service businesses often rely on flexible pay structures to attract, motivate, and retain staff. In addition to base salaries, payroll may include several variable components. Getting these right is critical for accuracy and compliance in both Australia and New Zealand.

Key types of variable pay include:

  • Overtime – extra pay for hours worked beyond agreed limits, typically at higher rates.
  • Bonuses – one-off or recurring payments linked to performance, targets, or company profits.
  • Commissions – compensation tied directly to sales or revenue results.
  • Penalty rates – higher hourly pay for evenings, weekends, or public holidays.
  • Allowances – additional pay for expenses such as meals, travel, uniforms, or tools.
  • Shift loadings – extra pay for irregular, rotating, or unsociable shifts.

Each of these elements must be recorded and processed accurately in payroll. Doing so helps businesses meet compliance requirements, keep employees satisfied, and avoid costly errors or disputes.

Overtime payments

When staff work beyond agreed hours, they may be entitled to overtime pay. Rules vary by award, enterprise agreement, or, if in New Zealand, collective agreement, and often include higher hourly rates once thresholds are passed.

Overtime ensures employees are fairly compensated for additional effort, but it must be carefully tracked for compliance.

Bonuses and commissions

Bonuses are a great way to reward your team for hitting business or personal targets, whether through performance incentives or company profits.

Setting clear and transparent criteria, and calculating extra pay accurately through your payroll helps keep bonuses fair and hassle-free. With Xero Payroll for example, you can easily add compliant bonus payments directly to an employee’s payslip to streamline your payroll runs.

Penalty rates

In industries like hospitality or healthcare, staff often work evenings, weekends, or public holidays. Penalty rates compensate employees for working these hours and are usually set at higher multipliers. In Xero, you can add and customise these rates as pay items so you can easily calculate the right rate, every pay cycle.

Plus, as part of Xero’s service-based payroll management solution, you can run Payroll Employee Summary reports at any time, giving you oversight on exactly how much you’re spending on salary and wages.

Allowances

Your team might need extra pay for things like travel, meals, tools, or uniforms.

These allowances depend on the role and industry, but they still count for calculating extra pay. Keeping them accurate helps you meet employee entitlements and stay on top of tax obligations.

Shift loadings

Where staff work irregular or rotating shifts, shift loadings apply to compensate for inconvenient or unsociable hours. Remember, shift loadings must be factored into payroll bonuses and overtime systems for accuracy.

Using a service-based payroll management tool can make it easier to capture these variable pay components, so your team can spend less time calculating and more time focusing on clients.

Overtime calculation and compliance requirements

Overtime is a common cost for running a service business, whether in hospitality, consulting, or trades. But rules around calculating extra pay vary depending on your industry and local employment law, so it’s always best to look through official pay guides as a starting point.

In Australia, overtime payments are usually determined by modern awards or enterprise agreements. In New Zealand, employment contracts typically set the rules for overtime. Employers must:

  • Define when overtime applies (which, in Australia, is after 38 hours per week)
  • Apply the correct multiplier (like time-and-a-half or double time)
  • Record hours worked accurately for any overtime payroll calculations

Best practices for small businesses

To stay compliant and make overtime management easier, small businesses can:

  • Keep employment agreements up-to-date so overtime rules are clear from the start
  • Check pay guides regularly as awards and agreements often change
  • Use timesheets consistently to keep accurate records of hours worked
  • Automate where possible with tools like Xero Payroll to calculate extra pay and apply multipliers correctly
  • Review reports often to catch errors early and ensure you’re always audit-ready

Remember, failure to follow overtime payment regulation can result in backpay claims or fines. Using innovative payroll systems like Xero helps automate overtime calculations, reduce errors, and stay compliant.

Bonus structure setup and payroll integration

Bonuses are a great way to motivate your team, but they can be tricky to manage. Whether it’s a one-off reward, quarterly performance bonus, or annual profit-share, the key is integrating them smoothly into your payroll system.

Incentive pay payroll best practices include:

  • Setting clear, transparent criteria for eligibility
  • Defining how and when bonuses are paid (like in cash, a voucher or as additional leave)
  • Ensuring tax and super or KiwiSaver obligations are accounted for

With Xero Payroll, you can enter bonus details directly into your payroll run, so everything from compliance to reporting is handled seamlessly.

Plus, with Xero Me, your employees can access their own payslips, view leave balances, submit timesheets, and even check that their bonus has been added correctly – all from the app. This puts more control in their hands and saves valuable admin time for managers.

Case study: Priyanka’s bonus check

Priyanka works in a busy consulting firm. At the end of the quarter, she receives a performance bonus. Using the Xero Me app, she quickly checks her payslip on her phone to confirm the bonus has been included.

When she notices the amount looks different from what was agreed, she flags it straight away with her payroll manager. They immediately update the record, and Priyanka receives the corrected payment in the next run. Thanks to Xero Payroll and Xero Me working together, everything is reported properly and fixed quickly – with no stress for either side.

Commission tracking and payment systems

For sales-driven service businesses setting up payroll for employees, commissions are vital to reward and retain top performers. But manual tracking can create headaches and errors.

A good commission tracking for service teams system should:

  • Automatically record commission earned against sales
  • Link commission to payroll runs to ensure timely payment
  • Provide reporting for both managers and employees

By using a service-based payroll management like Xero, you’ll gain visibility across the business and make commission management transparent and efficient.

Compliance considerations for incentive payments

No matter how you pay your team – through overtime, bonuses, or commission – there are always compliance boxes to tick. That means keeping on top of:

  • Tax obligations in both Australia and New Zealand
  • Superannuation (AU) or KiwiSaver (NZ) contributions
  • Accurate records for audits and reporting

Following incentive pay payroll best practices not only keeps you compliant, it also builds trust. When your team can see that calculating extra pay is done correctly, they feel more confident and valued – which helps with morale and retention.

The good news? Managing payroll in service businesses doesn’t have to be complicated. By using the right tools to pay payroll bonuses, manage overtime payroll calculations, and set up commission tracking for service teams, payroll can be a breeze.

Xero Payroll is built to help small businesses across Australia and New Zealand with flexible, easy-to-use, and compliant features. And if you’re in Australia, Single Touch Payroll makes it even easier still – automatically sending the right information to the ATO every pay run, so you can flag errors early.

FAQs on managing overtime, bonuses and commissions

Here are some answers to frequently asked questions on managing overtime, bonuses and commissions for service teams.

How is overtime calculated in Australia and New Zealand?

In AU, overtime is set by awards or agreements, often after 38 hours per week. In NZ, it’s usually contract-based.

Do I have to pay superannuation or KiwiSaver on bonuses and commissions?

Yes. Both AU and NZ require super/ KiwiSaver contributions on most incentive payments.

What’s the difference between bonuses and commissions?

Bonuses are discretionary or performance-based, while commissions are linked directly to sales or revenue.

How can small businesses prevent payroll errors with overtime and bonuses?

By automating calculations with payroll tools, using timesheets, and reviewing reports regularly.

What happens if I miscalculate incentive pay?

You may face backpay claims, fines, and employee dissatisfaction. Accurate, compliant payroll systems help avoid this.

Disclaimer

Xero does not provide accounting, tax, business or legal advice. This guide has been provided for information purposes only. You should consult your own professional advisors for advice directly relating to your business or before taking action in relation to any of the content provided.

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